BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C04SP1|AL427593
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 1920 0.0
>3x_Contig1574
Length = 8021
Score = 1920 bits (967), Expect = 0.0
Identities = 971/973 (99%)
Strand = Plus / Minus
Query: 1 atctttttgatttgtaktcatcttcggaacctgatggcgatgtagattttgttgtcgttc 60
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5714 atctttttgatttggagtcatcttcggaacctgatggcgatgtagattttgttgtcgttc 5655
Query: 61 tagctcgttttcttgattgactagctgcttcatcagcttcagatccttccacttctggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5654 tagctcgttttcttgattgactagctgcttcatcagcttcagatccttccacttctggag 5595
Query: 121 attccgtatctctagtgtaattctttggtgaggcggacttccctgatgcctcttcttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5594 attccgtatctctagtgtaattctttggtgaggcggacttccctgatgcctcttcttcct 5535
Query: 181 tcaaaatatcttggtcttcgggatcggtgccatcttttgaagagcgtctgctttcgcgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5534 tcaaaatatcttggtcttcgggatcggtgccatcttttgaagagcgtctgctttcgcgta 5475
Query: 241 gggctttctctagcataagttgataatgtttctcttccctggcactggatgtagcacgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5474 gggctttctctagcataagttgataatgtttctcttccctggcactggatgtagcacgtt 5415
Query: 301 tacgatctgcaaccttttgattttcatcaattggatcaaactcgcgcttgggaatatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5414 tacgatctgcaaccttttgattttcatcaattggatcaaactcgcgcttgggaatatttt 5355
Query: 361 catccttatcttcaccatttccggagtccgcaatagaatcttcaccttcatccttcgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5354 catccttatcttcaccatttccggagtccgcaatagaatcttcaccttcatccttcgata 5295
Query: 421 attcaacattactactatttctcctttgccgagataatctttgagatccaatatttccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5294 attcaacattactactatttctcctttgccgagataatctttgagatccaatatttccac 5235
Query: 481 taaccactgagctagaaggagattggttctctagtgaacttccagcgtttgatacttctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5234 taaccactgagctagaaggagattggttctctagtgaacttccagcgtttgatacttctc 5175
Query: 541 catccgattcggagtttcttttcgaccttctatttttcctacggcgttgctgaattggct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5174 catccgattcggagtttcttttcgaccttctatttttcctacggcgttgctgaattggct 5115
Query: 601 tgtatattgacctcttctcaccaagatccgttgtgtagagcgagtgtagctctggtttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5114 tgtatattgacctcttctcaccaagatccgttgtgtagagcgagtgtagctctggtttac 5055
Query: 661 actgctcgcaccaatacttatccggagtttcctcctcagatatgcccacacaatatccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5054 actgctcgcaccaatacttatccggagtttcctcctcagatatgcccacacaatatccat 4995
Query: 721 gttgccaaacatggcattgttcacattgaatataaagacccgaatcatctggcggttcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4994 gttgccaaacatggcattgttcacattgaatataaagacccgaatcatctggcggttcaa 4935
Query: 781 ttttcccacaaatacaccgagtctcaccttcatcctcaggctctggatcagagtcctcta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4934 ttttcccacaaatacaccgagtctcaccttcatcctcaggctctggatcagagtcctcta 4875
Query: 841 catacttctctggtgcaaggtccgtccttccacggtccctcgtttctcgcttcattgcta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4874 catacttctctggtgcaaggtccgtccttccacggtccctcgtttctcgcttcattgcta 4815
Query: 901 tgattcaagatcccctcttctcgattattcgtcaaatatcagctgcaaatcgcccaaatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4814 tgattcaagatcccctcttctcgattattcgtcaaatatcagctgcaaatcgcccaaatt 4755
Query: 961 aaccgctctatgt 973
|||||||||||||
Sbjct: 4754 aaccgctctatgt 4742
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6986
Number of Sequences: 1807
Number of extensions: 6986
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)